Artinis’ PortaLite

Note: I am not affiliated with Artinis and they don’t pay me for this post. If you also sell portable NIRS device and would like to demo to me, I am happy to see it. Marco, the salesman of Artinis, gave me a demo of their wireless/portable NIRS
Xu Cui
50 sec read

Find anatomical location of a list of MNI coordinates

Quite often you need to know what is the brain structure (anatomical name) of a given coordinate, say (-8, 2, 6)? Is there a program for this? The answer is yes. Please download the following matlab script: cuixufindstructure.m This program requires
Xu Cui
31 sec read

Learning PaperBox in 2 minutes

PaperBox is a cloud reference manager ideal for labs and teams to collaborate. Get it here: http://www.peaya.com/paperbox Learning PaperBox in 2 minutes from Xu Cui
Xu Cui
6 sec read

Secrete usage of xjview: Creating a mask based on…

Many users have created masks from a T-test image; xjView also allows you to create a mask based anatomy. Say, if you want to create a mask of Amygdala, how to do that? (You need to use xjview 8.10. 1 min video demo at http://youtu.be/31q_6jumhhM) 1.
Xu Cui
22 sec read

An fMRI ROI analysis program (beta)

Previously I said I was developing a ROI analysis program (https://www.alivelearn.net/?p=1421). Here it is: Download main program (beta version) at https://www.alivelearn.net/xjview/xjviewpro/xjviewpro.p Download sample input excel file: https://www.
Xu Cui
21 sec read

Convert coordinates in MNI space to matrix space

Quite often you need to convert the coordinates of some voxels in MNI space to regular matrix coordinates. Below is a script to do so: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%% mni2cor %%%%%%%%%%%%%%%
Xu Cui
43 sec read