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PubMed 有中文版啦!

April 18th, 2017

PubMed是生物和医学领域必不可少的搜索引擎,每天百万名医生、教授、学生及其他科研人员等都会通过PubMed搜索自己感兴趣的科学文献、病例、综述、最新进展等。

可惜,PubMed是全英文的!!!

为了让中国的医生、科研人员、学生等能更迅速地从PubMed搜寻信息,我们Stork开发了这款 PubMed中文版。

您可以用中英文关键词搜索。中文关键词(比如“皮肤癌”)会自动被翻译成英文。搜索的结果用中英文显示,期刊根据影响因子高亮显示:

您点开一篇文献后,PubMed中文版会把摘要也翻译出来,方便您快速掌握文章内容,以节省您的宝贵时间:

您可能会问,这是机器还是人工翻译的?答案是具有深度学习能力的人工智能!

怎么访问这个网站呢?PubMed中文版的网址是 https://www.storkapp.me/pubmed/。这是Stork的高级功能,需要注册Stork账户并购买这个功能。

Author: Xu Cui Categories: deep learning, stork, writing Tags:

Stork开通自动翻译功能啦

January 17th, 2017

虽然美国读研究生的时候,一个很头疼的问题就是阅读科学文献。原因很多,但是其中一个就是文献里面有许多单词不知道意思,这就时不时地要查字典。到后来情况就逐渐变好了,但是在接触到新的领域的时候,又出现一些该领域的新词汇,又要学习这些单词。当时我想,如果有个工具可以自动把文献翻译成汉语就好了。

随着人工智能在翻译领域的进展,长句子的准确翻译变为可能。当然,与“信达雅”还是差距很大,不过通过一些例子感觉已经是达到“信”了,“达”也初步达到了。或许以后还可以“雅”。对科研人来讲,能够“信”其实就已经很好了,毕竟对英文也不是一点都不懂。

看到技术成熟,我们就给Stork(文献鸟)增添了高级功能:翻译!当Stork给我发邮件的时候,邮件里的文献已经翻译好了:

这样我就可以快速浏览文献,省不少时间。

打开某个文献,里面的摘要也翻译了:

总体感觉翻译得还不错,比普通的逐字翻译要好很多,可以作为阅读的辅助功能。

该功能是付费功能。如果感兴趣的话,可以参考下面页面的操作:

http://www.storkapp.me/translation.html

Author: Xu Cui Categories: programming, stork, web Tags:

A part-time position promoting Stork

September 2nd, 2016

Stork

Stork

We are looking for a passionate team member to join us in promoting Stork in the region of North America and Europe. Stork is research tool which notifies researchers new publications and grants based on their own keywords. It’s straightforward and easy to use.

Requirement:

  1. Major in biology related fields
  2. Minimum degree: BS
  3. Willing to learn
  4. This is a part-time job. Location does not matter. Working hours is flexible.

If you are interested, please contact us at iris@storkapp.me with your resume.

Author: Xu Cui Categories: stork Tags:

Stork是我最好的科研助手(2):经费提醒

August 11th, 2016

Stork

Stork

1. 我的导师是否有经费?
2. 我在寻找博后的职位;我未来的老板是否有足够的经费支持我?
3. 有多少经费拨给了我的研究领域(比如NIRS)?谁得到了这些经费?他们将用这些经费做什么?

你是否也曾考虑过这些问题?当我还是一个研究生的时候,我很少问这些关于“钱”的问题。“钱”似乎并不是一个“真正”的科学家应该在意的事。而当我得知我的导师为经费申请花着大半部分时间的时候,我更加疑惑了,他难道不应该把时间用在做实验以及撰写论文上吗?

当我开始博后研究时,我发现自己同样花费很多时间申请经费。我也逐渐意识到我的未来科研事业是否成功,很大一部分是由我是否能有足够稳定的经费支持来决定的。我见到一些同事,由于缺少经费不得不离开科研界。我想到如果能有一个工具及时提醒我当下的经费拨款情况,我的科学研究应当可以更加有的放矢。

Stork 就是这样一个工具。

我在Stork里输入如下关键字,“pearl chiu”(我之前同事的名字)以及“NIRS brain”(我的研究领域)。以下是Stork发给我的邮件:

Stork notifies me of awarded grants

Stork告知我获得拨款的研究者

有了Stork提供的信息,我了解了在我的研究领域,谁得到了经费以及他们打算用这笔经费做什么研究。实际上邮件里的第三个基金是拨给我的同事Manish, 用于他进行利用NIRS对静息状态下的脑回路的研究。我还看到Pearl得到了很大一笔经费,所以我给她发送了一封祝贺邮件。与Stork的另一个功能论文提醒比起来,经费提醒让我更早的对自己研究领域的趋势了如指掌。得到经费支持的研究,通常需要几年之后才有相关论文发表出来。

如果你也想变成第一个在你领域知道有哪些新经费颁发的人,快去试试Stork你一定会发现很多惊喜!

Author: Xu Cui Categories: brain, programming, stork, web, writing Tags:

Stork is my best research assistant (2): Grant alert

April 15th, 2016

Stork

Stork

  1. Does my boss have money?
  2. I am looking for a postdoc position; does my future boss have enough funding to support me?
  3. How much money was awarded to my field (e.g. NIRS)? And who got the money? What are they going to do with the money?

Have you ever wondered these questions? In the early years as a graduate students, I rarely asked “money” questions. It does not sound what a “true” scientist should care.  I was even puzzled when I realized my boss spent more than half of his time writing grant applications - shouldn’t he spend most of his time doing experiments and write papers?

As a postdoc I found myself spend a lot of time writing grant applications; and realized my career is critically depending on the success of securing enough funding. I also see a few colleagues had to leave academia due to lack of funding.  It would be nice if there is a tool which can notify me of the funding situation in a timely manner.

Stork is such a tool.

I entered some keywords into Stork, including “pearl chiu” (my former colleague) and “nirs brain” (my research field). Below is a letter I got from Stork:

Stork notifies me of awarded grants

Stork notifies me of awarded grants

With the information Stork provides, I know who in our field got grants and what they proposed. In fact the 3rd one is my colleague Manish who is interested in using NIRS in resting-state brain network study. I also got to know Pearl got a big gran, so I sent her a congratulation note.

Compared to journal papers alert, grants alert helps me to know the trend of my field much earlier. This is because publications are usually a few years delayed from grants.

If you also want to be the first one to know new grants in your field, why don’t you give Stork a try? I’m sure you’ll be delighted!

Author: Xu Cui Categories: brain, life, programming, stork, web, writing Tags:

Stork is my best research assistant

December 18th, 2015

Stork

Stork

When I was a graduate student at Baylor College of Medicine, I found myself often in an embarrassing situation — I felt completely lost when my fellow graduate students heatedly discussed a paper in our field but I never heard of this publication at all. Later a PubMed search revealed that this paper was indeed published more than a year ago!

There was even a time when I didn’t know my own boss had a new publication. It was in part because I was in a big lab and I was not involved in that project. But still, I felt like I didn’t fulfill my duty as an up-to-date young researcher.

My problem was finally resolved several years later when we developed the Eye function in Paperbox, which is now renamed Stork. Stork is pretty easy to use. What I need to do is to simply enter all my keywords and researchers’ names and Stork takes care of everything. Stork will help me perform the search every day and send me the results. After using Stork, now I’m the first one in the lab to know that “The most renowned David Boas has a new publication” or “There’s another group using NIRS to hyperscan”. I never embarrass myself again and gain a lot of confidence.

I have more than 50 keywords. You may ask “will Stork send you 50 emails a day?” Not at all because Stork respects my inbox. It will compile all results into one email.

Stork is also smart. As a researcher, I am sometimes overwhelmed by the flood of publications and have headache in determining which ones are worth reading. Stork helps! She will mark the impact factor of each publication with the yellow color. The more yellow, the higher the impact factor. Therefore I only need to read top publications when I am busy.

If you also want to be the first one to know new publications in your field, why don’t you give Stork a try? I’m sure you’ll be delighted!

Below is one sample email Stork sent to me.

Stork Sample Email

Stork Sample Email

Below are some of the key words I’ve been using. Anyone work on NIRS and fMRI can borrow:

  1. (fumiko hoeft) AND ((university of california) OR stanford)   
  2. (jian li) AND ((phelps) OR montague OR (Peking University psychology))   
  3. baldwin Philip   
  4. brooks king-casas   
  5. cell[ta] fmri   
  6. chao liu, beijing normal university   
  7. chess stetson   
  8. David Boas   
  9. David Hong stanford   
  10. dongni yang baylor   
  11. eagleman dm [au] baylor   
  12. fmri deception   
  13. fmri resting state parent child   
  14. hanli liu, university of texas   
  15. Hosseini, S M Hadi   
  16. hyperscanning   
  17. iphone   
  18. Jack Gallant   
  19. Kendrick Kay   
  20. koniku   
  21. lumosity   
  22. montague pr [au] baylor   
  23. montague pr[au] Virginia Tech   
  24. MyConnectome   
  25. nature[ta] fmri   
  26. ning gao, tsinghua   
  27. nirs brain   
  28. nirs deception   
  29. nu zhang, washington   
  30. pearl chiu   
  31. reiss al [au] stanford   
  32. rory sayres   
  33. Russell Poldrack, stanford   
  34. saggar manish   
  35. science[ta] fmri   
  36. signe bray   
  37. smart phone brain   
  38. social nirs   
  39. stanford kesler shelli   
  40. ting ni   
  41. xianchun li, “East China Normal University”   
  42. xiaolin zhou[au] peking   
  43. xu cui AND (stanford OR baylor OR Texas)   
  44. xu q[au] harvard   
  45. yan song[au] stanford   
  46. yangming wang, peking   
  47. yufeng shen [au]   
  48. yulong li (stanford or Peking)   
  49. zen meditation   
  50. zhu chao-zhe beijing   
Author: Xu Cui Categories: brain, life, programming, stork, web, writing Tags:

文献鸟Stork是我的科研好帮手

December 17th, 2015

我在Baylor College of Medicine读研究生的时候经常遇到一种尴尬局面,就是同学们在热烈讨论本领域某篇文献的时候,我一脸茫然 — 因为我压根就不知道这篇文章。回头PubMed查查,这篇文章其实已经发表有一年了。

更绝的一个例子是,有次我老板发了文章我都不知道。当然,实验室大,有许多项目,我没有涉及那个项目。不过还是有点说不过去。

若干年后,我们开发的PaperBox的眼睛功能,现在改名为文献鸟Stork,才彻底解决了我这个问题。文献鸟用起来蛮简单的,我把能想到的所有我想跟踪的关键词和人名都输进去,然后我什么都不需要管了。文献鸟Stork会每天帮我自动搜索,把结果发送给我。现在我都是实验室第一个知道“大牛David Boas发新文章了”或者“又有人用nirs做超扫描了”等等。有面子,还长自信 :)

我有50余个关键词,文献鸟Stork会不会给我一天发50封邮件呢?不会。文献鸟Stork不会滥用你的邮箱;她会把每天的结果总结一下,最多只发一封信。

另外她还很聪明。因为有时结果多,我需要快速知道那篇文章更值得一看,文献鸟Stork就会把每篇文章对应的期刊的影响因子用颜色标记出来。颜色越黄,说明期刊越好。我在时间紧张的时候就可以只看顶尖期刊的文章了。

Stork还支持从简单到复杂的关键词。如果我想了解某个领域,比如fMRI领域,那么我就可以用一个简单的关键词fMRI即可。如果我想了解用fMRI这种方法研究情绪的文献,则我的关键词就是fMRI emotion。默认情况下,不同单词之间的关系相当于逻辑符AND,因此只要文章中同时出现了fMRI和emotion(不管顺序,也不管两个词之间有没有其它词),就会被推送。但是,如果我只想要fMRI emotion连在一起的文章,这时候加个双引号就可以了:”fMRI emotion”。

当然,更加复杂的逻辑符Stork也是支持的。比如(Nature[Journal]) AND (fMRI OR EEG) AND emotion NOT facial, 这个关键词就说明我对发表在Nature杂志上、用fMRI或者EEG(两种方法都可以)、研究情绪、但是又不包含facial这样的文献。是不是很强大?

如果对某个研究人员的文献感兴趣,可以直接用他的全名作为关键词。比如David Boas。不要加引号。当然,有的名字实在是太普通了,会有许多重名的,这时候加上他所在的单位或者城市名即可。比如David Boas, Harvard University。如果这个人可能在两个地方都工作,可以用OR,比如(Fumiko Hoeft) AND ((university of california) OR stanford)。

如果不用全名而只用简写名,就要用下面格式,姓、空格、简写。比如Reiss AL。  不要加引号,中间也不要加逗号之类的。

请大家赶快用文献鸟Stork吧,相信你会眼睛一亮的!

附录:

下面是文献鸟Stork给我发的一封信样例:

Stork Sample Email

Stork Sample Email

下面是我自己的一些关键词,做近红外或fMRI的同学们可以借鉴呢!

  1. (fumiko hoeft) AND ((university of california) OR stanford)   
  2. (jian li) AND ((phelps) OR montague OR (Peking University psychology))   
  3. baldwin Philip   
  4. brooks king-casas   
  5. cell[ta] fmri   
  6. chao liu, beijing normal university   
  7. chess stetson   
  8. David Boas   
  9. David Hong stanford   
  10. dongni yang baylor   
  11. eagleman dm [au] baylor   
  12. fmri deception   
  13. fmri resting state parent child   
  14. hanli liu, university of texas   
  15. Hosseini, S M Hadi   
  16. hyperscanning   
  17. iphone   
  18. Jack Gallant   
  19. Kendrick Kay   
  20. koniku   
  21. lumosity   
  22. montague pr [au] baylor   
  23. montague pr[au] Virginia Tech   
  24. MyConnectome   
  25. nature[ta] fmri   
  26. ning gao, tsinghua   
  27. nirs brain   
  28. nirs deception   
  29. nu zhang, washington   
  30. pearl chiu   
  31. reiss al [au] stanford   
  32. rory sayres   
  33. Russell Poldrack, stanford   
  34. saggar manish   
  35. science[ta] fmri   
  36. signe bray   
  37. smart phone brain   
  38. social nirs   
  39. stanford kesler shelli   
  40. ting ni   
  41. xianchun li, “East China Normal University”   
  42. xiaolin zhou[au] peking   
  43. xu cui AND (stanford OR baylor OR Texas)   
  44. xu q[au] harvard   
  45. yan song[au] stanford   
  46. yangming wang, peking   
  47. yufeng shen [au]   
  48. yulong li (stanford or Peking)   
  49. zen meditation   
  50. zhu chao-zhe beijing   
Author: Xu Cui Categories: brain, life, paperbox, programming, stork, web Tags: