Check out recon-all procedures here
rawavg
orig
nu
T1
brainmask
norm
nu_noneck
aseg.auto
aseg.auto_noCCseg
aseg
brain
wm.seg
filled
lh.orig
lh.smoothwm
lh.inflated.nofix
lh.qsphere.nofix
lh.white
lh.pial
lh.inflated
lh.sphere
Sorry to disturb you.I am a student from Peking University.I learn to study FreeSurfer recently and met some problems.
across recon-all the image I get is only a piece of brain.It is not full brain,
I don’t know why.Can you reply to my email? [email protected]