Projection of a NIRS channel on a brain surface

35 sec read

When analyzing the data in our concurrent NIRS-fMRI study, we are particularly interested in how the NIRS signals were correlated to the fMRI signal. To answer the question we need to create an ROI (region of interest) in brain which is directly underneath the NIRS channel (which is on the skull). So a projection of the NIRS channel on the brain surface is necessary.

It might be easy if the brain were a perfect sphere, or at least doable if it is smooth. But brain surface is anything but smooth. What we did is:

  1. Create a brain surface mask. This is easy using BET (http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/BET)
  2. Loop over all voxels on the surface, calculate the distance between the NIRS channel (point A) and the voxel
  3. Find the voxel which is closest to the NIRS channel (It is point B in the figure below)
Projection of NIRS channel on brain surface
Projection of NIRS channel on brain surface



文献鸟 618 大优惠


写作助手,把中式英语变成专业英文


AI writing papers with real references


Want to receive new post notification? 有新文章通知我

第七十二期fNIRS Journal Club通知2026/6/6, 10am 曹家铭博士

随着近年来深度学习在DOT/fNIRS重建中的应用,研究者往往需要大规模地生成仿真数据,高性能的仿真和处理软件则显得尤为重要。来自澳门大学的曹家铭教授将介绍一款针对DOT的高性能光子仿真Python包
Wanling Zhu
10 sec read

第七十一期fNIRS Journal Club视频 段海军团队

Youtube: https://youtu.be/lMuG2bY4pvs 优酷:https://v.youku.com/v_show/id_XNjUyODE0NzI3Ng==.html 尽管已有成瘾
Wanling Zhu
18 sec read

第七十一期fNIRS Journal Club通知2026/5/9, 10am 段海军团队

尽管已有成瘾研究对毒品渴求的神经生物学机制进行了深入探索,但反复毒品吸食与戒断发作对人类社会行为的影响迄今仍尚未明晰。陕西师范大学段海军课题组的王一凡将介绍他们结合fNIRS超扫描技术与人际互动范式,
Wanling Zhu
13 sec read

Leave a Reply

Your email address will not be published. Required fields are marked *