Projection of a NIRS channel on a brain surface

35 sec read

When analyzing the data in our concurrent NIRS-fMRI study, we are particularly interested in how the NIRS signals were correlated to the fMRI signal. To answer the question we need to create an ROI (region of interest) in brain which is directly underneath the NIRS channel (which is on the skull). So a projection of the NIRS channel on the brain surface is necessary.

It might be easy if the brain were a perfect sphere, or at least doable if it is smooth. But brain surface is anything but smooth. What we did is:

  1. Create a brain surface mask. This is easy using BET (http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/BET)
  2. Loop over all voxels on the surface, calculate the distance between the NIRS channel (point A) and the voxel
  3. Find the voxel which is closest to the NIRS channel (It is point B in the figure below)
Projection of NIRS channel on brain surface
Projection of NIRS channel on brain surface



写作助手,把中式英语变成专业英文


AI writing papers with real references


Want to receive new post notification? 有新文章通知我

第六十八期fNIRS Journal Club视频 夏伟力

Youtube: https://youtu.be/R2rHR5Wq9AU 优酷: https://v.youku.com/v_show/id_XNjUwNjAzNzA4MA==.html 以左侧背外
Wanling Zhu
18 sec read

第六十八期fNIRS Journal Club通知2025/12/6, 10am 夏伟力

以左侧背外侧前额叶皮质(DLPFC)为靶点的间歇性 θ 爆发刺激(iTBS)已成为治疗重度抑郁障碍的成熟方案,但其在刺激过程中及刺激后瞬时对神经兴奋性的影响仍不清楚。来自香港理工大学的夏伟力将分享探讨
Wanling Zhu
13 sec read

第六十七期fNIRS Journal Club视频 肖雅琼教授团队

Youtube: https://youtu.be/c8ei0HMMxHU 优酷: https://v.youku.com/v_show/id_XNjUwMDQyMjcwNA==.html 近年来,越
Wanling Zhu
17 sec read

Leave a Reply

Your email address will not be published. Required fields are marked *